We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5ELN | 2016 | 4 |
| 3OL3 | 2010 | 4 |
| 4N5F | 2013 | 4 |
| 2M4Y | 2013 | 4 |
| 4JGB | 2013 | 4 |
| 6AMZ | 2017 | 4 |
| 5B8H | 2015 | 4 |
| 3HZU | 2009 | 4 |
| 4MAQ | 2013 | 4 |
| 4M0J | 2013 | 4 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 6nbo | - | https://www.sciencedirect.com/science/article/pii/S0269749120364927 | Purification, characterization, and catalytic mechanism of N-Isopropylammelide isopropylaminohydrolase (AtzC) involved in the degradation of s-triazine | 2021 | N Zhou, J Wang, W Wang, X Wu- Environmental Pollution, 2021 - Elsevier | The structural architecture of AtzC resembled that of cytosine deaminase in class III Purification and structural characterization of AtzE produced by the model bacterium Pseudomonas sp and substrate specificity of AtzC were studied, and the function, structure , and evolutionary |
| 2 | 6auj | 3gwc, 3ix6 | https://www.mdpi.com/1420-3049/24/8/1638 | Targeting Methyltransferases in Human Pathogenic Bacteria: Insights into Thymidylate Synthase (TS) and Flavin-Dependent TS (FDTS) | 2019 | C Pozzi, L Lopresti, G Tassone, S Mangani- Molecules, 2019 - mdpi.com | This review is aimed to summarize the current understanding of structure and function of bTSs and FDTSs and the recent id 1F4B [17]), Brucella melitensis (BmTS; PDB id 3IX6, unpublished research), and Elizabethkingia anophelis (EaTS; PDB id 6AUJ , unpublished research |
| 3 | 5vmt | 3hja | https://www.sciencedirect.com/science/article/pii/S0882401018316140 | Crystal structure of GAPDH of Streptococcus agalactiae and characterization of its interaction with extracellular matrix molecules | 2018 | R Nagarajan, S Sankar, K Ponnuraj- Microbial pathogenesis, 2018 - Elsevier | S1). The protein BLAST against Protein Data Bank ( PDB ) led to 97 hits with recently determined 71% and 69% sequence identity with S. pneumoniae (5M6D), Nessiera gonorrhea ( 5VMT ) and S to mixed-holo structure (highest resolution of 1.36 ), the present structure (Apo, 2.6 |
| 4 | 5i1f | - | https://www.jbc.org/article/S0021-9258(21)00156-3/abstract | Bacillus subtilis YngB contributes to wall teichoic acid glucosylation and glycolipid formation during anaerobic growth | 2021 | CH Wu, J Rismondo, RML Morgan, Y Shen- Journal of Biological, 2021 - ASBMB | Section of Structural and Synthetic Biology, Department of Infectious Disease, Imperial College London, London, United Kingdom The crystal structure of YngB revealed that the protein has the typical fold and all necessary active site features of a functional UGPase |
| 5 | 4o5o | - | https://pubs.acs.org/doi/abs/10.1021/acs.biochem.7b01186 | Engineering Erg10 Thiolase from Saccharomyces cerevisiae as a Synthetic Toolkit for the Production of Branched-Chain Alcohols | 2018 | P Torres-Salas, V Bernal, F Lopez-Gallego- Biochemistry, 2018 - ACS Publications | Using a combined computational/experimental approach, and guided by structural information, we have studied the potential of thiolases to with novel properties, the naturally occurring metabolism of microorganisms is not always sufficient to obtain any desired structure |
| 6 | 3ijp | - | https://www.nature.com/articles/s41598-018-26291-x | Crystal structure of dihydrodipicolinate reductase (Pa DHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor | 2018 | CW Lee, SH Park, SG Lee, HH Park, HJ Kim, HJ Park- Scientific reports, 2018 - nature.com | EcDHDPR; UniProtKB: P04036; PDB : 1DRU), B. henselae (BhDHDPR; UniProtKB: Q6G2G3; PDB : 3IJP ), A. variabilis P40110; PDB : 5EER), and M. tuberculosis (MtDHDPR; UniProtKB: P9WP23; PDB : 1YL5 The crystal structure of DPA-bound PaDHDPR was also obtained in the |
| 7 | 4xgi | - | https://pubs.rsc.org/en/content/articlehtml/2021/cy/d1cy00376c | Rational engineering of Acinetobacter tandoii glutamate dehydrogenase for asymmetric synthesis of l-homoalanine through biocatalytic cascades | 2021 | L Wang, S Diao, Y Sun, S Jiang, Y Liu- Catalysis Science &, 2021 - pubs.rsc.org | on the crystal structure of GluDH from Burkholderia thailandensis ( PDB ID: 4XGI , resolution: 2.0 ) in symbiosum ( PDB ID: 1AUP and 1BGV) and GluDH from Corynebacterium glutamicum ( PDB ID: 5IJZ amino acid may cause loss of the inherent stability of the hydration structure |
| 8 | 3rd5 | - | http://www.jbc.org/content/290/52/30728.short | Pleiotropic Functions of Tumor Suppressor WWOX in Normal and Cancer Cells | 2015 | M Abu-Remaileh, E Joy-Dodson - Journal of Biological , 2015 - ASBMB | ... B, a structural model of the SDR region (generated by the RosettaCM protocol as implemented by the Robetta server (78), starting from PDB ID 3rd5 (58) as a template structure) shows an extended central β sheet formed by Rossmann folds. ... |
| 9 | 5koi | - | https://www.sciencedirect.com/science/article/pii/S1875536421600444 | Bufotenine and its derivatives: synthesis, analgesic effects identification and computational target prediction | 2021 | Z Chao, C Min, SUN Shan-Liang, W Jiao-Jiao- Chinese Journal of, 2021 - Elsevier | Class Target PDBa Glideb MMGBSA Class Target PDB Glide MMGBSA Class Target PDB Glide MMGBSA mGLuR5 4OO9 0.52 37.15 GLP1 3IOL 4.50 23.75 NaV1.7 5KOI 2.85 25.53 silver chlor- ide is added for substitution to obtain a stable structure of compound 6 with |
| 10 | 3men | - | http://pubs.acs.org/doi/abs/10.1021/bi101859k | Structure of Prokaryotic Polyamine Deacetylase Reveals Evolutionary Functional Relationships with Eukaryotic Histone Deacetylases | 2011 | PM Lombardi, HD Angell, DA Whittington, EF Flynn? - Biochemistry, 2011 - ACS Publications | The recently solved X-ray crystal structure of the Burkholderia pseudomallei APAH dimer (PDB ID: 3MEN; 34% sequence identity with M. ramosa APAH) contains a 16-residue L2 loop insertion (A79−R101) between helices B2 and B3. |