We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 4EMB | 2012 | 2 |
| 3I4T | 2009 | 2 |
| 4EGQ | 2012 | 2 |
| 4EFZ | 2012 | 2 |
| 3KXQ | 2009 | 2 |
| 6U79 | 2020 | 2 |
| 3HZU | 2009 | 2 |
| 3V9P | 2012 | 2 |
| 6PTG | 2019 | 2 |
| 3HN6 | 2009 | 2 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5b8i | - | http://www.plantphysiol.org/content/182/2/1142?utm_source=TrendMD&utm_medium=cpc... | Two SnRK2-interacting calcium sensor isoforms negatively regulate SnRK2 activity by different mechanisms | 2020 | K Tarnowski, M Klimecka, A Ciesielski, G Goch- Plant, 2020 - Am Soc Plant Biol | Skip to main content |
| 2 | 2mj3 | - | https://www.frontiersin.org/articles/10.3389/fenrg.2019.00079/abstract | Evolutionary relationships between low potential ferredoxin and flavodoxin electron carriers | 2019 | IJ Campbell, GN Bennett, JJ Silberg- Frontiers in Energy Research, 2019 - frontiersin.org | This bioinformatic study highlights understudied PECs whose structure , stability, and partner specificity should be 1CZP, 2WLB, 3LXF, 1B9R, 1UWM, 1PDX, 1M2D, 1I7H, 3AH7, 2MJD, 2MJ3 , 2Y5C, 5FFI For Flds, we used PDB IDs 2FZ5, 1FLD, 4HEQ, 2HNA, 2FX2, 3F6R, 3KAP |
| 3 | 3inn | - | http://pubs.acs.org/doi/abs/10.1021/bi1004206 | Substrate-induced closing of the active site revealed by the crystal structure of pantothenate synthetase from Staphylococcus aureus | 2010 | A Satoh, S Konishi, H Tamura, HG Stickland? - Biochemistry, 2010 - ACS Publications | ... entry 2EJC) and the ATP complex structure of a protein annotated as PS of Brucella melitensis (PDB entries 3INN). In general, the PS protomer can be divided into two domains (N- and C-terminal domains), with the active site located at the interface of these domains. ... |
| 4 | 4f2n | - | https://scripts.iucr.org/cgi-bin/paper?or5020 | Crystal structure of an iron superoxide dismutase from the pathogenic amoeba Acanthamoeba castellanii | 2019 | O Dao, K Asaithambi, BK Na, KH Lee- Section F: Structural Biology, 2019 - scripts.iucr.org | et al., 2014), P. falciparum ( PDB entry 2bpi; Boucher et al., 2006) and L. major ( PDB entry 4f2n ; Phan et al., 2015) and of MnSOD from Homo sapiens ( PDB entry 5vf9 architecture of AcFeSOD is similar to those of other Fe/MnSODs, including the E. coli FeSOD structure (Fig |
| 5 | 3d5t | - | http://onlinelibrary.wiley.com/doi/10.1002/prot.24743/full | Structures of citrate synthase and malate dehydrogenase of Mycobacterium tuberculosis | 2015 | DM Ferraris, R Spallek, W Oehlmann… - Proteins: Structure, …, 2015 - Wiley Online Library | ... thermophilus (4KDE), Thermus flavus (1BDM), Aquaspirillum articum (1B8P), and Burkholderiapseudomallei (3D5T). ... RMSD = 1.4 Å) and malate dehydrogenase from T. flavus (PDB code =1BMD ... The structure of M. tuberculosis malate dehydrogenase shows the presence of a ... |
| 6 | 4noz | 4mh4 | https://pubs.acs.org/doi/abs/10.1021/acscatal.0c01257 | Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle | 2020 | R Mateus Domingos, RD Teixeira, A Zeida- ACS, 2020 - ACS Publications | The Ohr active site architecture is composed of two cysteines structures (Figure S1). Notably, when analyzing the other Ohr structures available in the PDB , we observed that the position of the Arg-loop in the Bacillus subtilis OhrB (BsOhrB) structure presents an intermediate |
| 7 | 2kwl | 2lol, 2lky, 2l3v | http://link.springer.com/10.1140/epje/i2013-13062-7 | Protein packing defects heat up interfacial water | 2013 | MB Sierra, SR Accordino, JA Rodriguez-Fris? - The European Physical Journal E, 2013 - Springer | ... 2BZT, 2eyz, 2FDQ, 2GEQ, 2jqx, 2JQY, 2JU6, 2K0P, 2K4Q, 2KJG, 2KV4, 2KWD, 2KWL, 2L3V, 2L4V ... ex- plicitly the situation for one of the proteins studied: the p53 protein (PDB 2GEQ ... this molecule represents one of the largest dehydron clusters in the Protein Data Bank [9]. From ... |
| 8 | 3sdo | - | https://link.springer.com/article/10.1007/s12539-017-0266-z | A Comprehensive Computational Analysis of Mycobacterium Genomes Pinpoints the Genes Co-occurring with YczE, a Membrane Protein Coding Gene | 2017 | T Milano, S Angelaccio, A Tramonti, ML di Salvo- Interdisciplinary, 2017 - Springer | Clustal Omega multiple sequence alignment between the “luciferase-like” cluster sequences and a set of PDB structures detected by Phyre2 and/or HHpred. Sequence ids refer to Table 3 while PDB codes indicate: 3SDO|A, the chain A of nitrilotriacetate monooxygenase from Burkholderia pseudomallei |
| 9 | 6ok4 | - | https://onlinelibrary.wiley.com/doi/abs/10.1002/pro.3975 | Chlamydia trachomatis glyceraldehyde 3phosphate dehydrogenase: Enzyme kinetics, highresolution crystal structure, and plasminogen binding | 2020 | N Schormann, J Campos, R Motamed- Protein, 2020 - Wiley Online Library | Chlamydia trachomatis glyceraldehyde 3phosphate dehydrogenase: Enzyme kinetics, highresolution crystal structure , and plasminogen binding. Norbert Schormann We describe here the highresolution crystal structure of the holo enzyme refined at 1.5 resolution |
| 10 | 4ed9 | - | https://www.sciencedirect.com/science/article/pii/S1570963918301808 | Rv3272 encodes a novel Family III CoA transferase that alters the cell wall lipid profile and protects mycobacteria from acidic and oxidative stress | 2018 | KS Shrimant, S Pandey, A Ansari, S Das- et Biophysica Acta (BBA, 2018 - Elsevier | The structure was found similar to the homologues available including MCR ( PDB ID: 1X74), CaiB ( PDB ID: 1XA3), FRC ( PDB ID: 2VJQ), FRC ( PDB ID: 3UBM), ACOCT ( PDB ID: 4ED9 ), YfdE ( PDB ID: 4HL6 3.5. Solution structure using Small Angle X-ray Scattering (SAXS). |