We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3I4T | 2009 | 2 |
| 5J6B | 2016 | 2 |
| 6CUM | 2018 | 2 |
| 5T8Z | 2016 | 2 |
| 5U2W | 2017 | 2 |
| 3HZU | 2009 | 2 |
| 3HN6 | 2009 | 2 |
| 7KXA | 2020 | 2 |
| 6B1L | 2018 | 2 |
| 6C46 | 2018 | 2 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3u0d | - | https://www.sciencedirect.com/science/article/pii/S1093326321000309 | Acute phase 1-acid glycoprotein as a siderophore-capturing component of the human plasma: A molecular modeling study | 2021 | SA Samsonov, F Zsila, M Maszota-Zieleniak- Journal of Molecular, 2021 - Elsevier | JavaScript is disabled on your browser. Please enable JavaScript to use all the features on this page. Skip to main content Skip to article |
| 2 | 4wxt | - | https://www.sciencedirect.com/science/article/pii/S014181301830610X | Inhibition of thioredoxin A1 from Corynebacterium pseudotuberculosis by polyanions and flavonoids | 2018 | RJ Eberle, LA Kawai, FR de Moraes, D Olivier- International journal of, 2018 - Elsevier | The initial model of the Cp-TrxA1 protein was obtained by homology modeling with the M. avium Trx structure ( PDB : 4WXT ; 50% homology), in order to Structural superposition of the Cp-TrxA1 homology model and the M. avium Trx structure showed a RMSD of 0.188 (Fig |
| 3 | 6ok4 | 4lsm, 4k9d | https://www.sciencedirect.com/science/article/pii/S0300908421000249 | Structure determination and analyses of the GAPDH from the parasite Schistosoma mansoni, the first one from a platyhelminth | 2021 | S Boreiko, M Silva, J Iulek- Biochimie, 2021 - Elsevier | The GAPDH’s structures selected for sequence alignment were from: Brugia malayi, Bmal - PDB ID: 4K9D ... and Chlamydia trachomatis, Ctra - PDB ID: 6OK4 [66] |
| 4 | 4kyx | - | http://www.nature.com/ncomms/2015/150804/ncomms8871/full/ncomms8871.html | Crystal structure, biochemical and cellular activities demonstrate separate functions of MTH1 and MTH2 | 2015 | M Carter, AS Jemth, A Hagenkort, BDG Page… - Nature …, 2015 - nature.com | ... The structure was solved by molecular replacement of the template structure file with PDB ID 4KYX using MolRep, and Arp/wARP was used for building the initial model, followed by iterative building cycles using the Refine program in Phenix ... |
| 5 | 4wec | - | http://www.biochemj.org/content/474/6/907.abstract | Binding of NADP+ triggers an open-to-closed transition in a mycobacterial FabG -ketoacyl-ACP reductase | 2017 | M Blaise, N Van Wyk, F Banres-Roquet - Biochemical , 2017 - biochemj.org | ... A BLAST analysis using the MSMEG_6753 primary sequence to query the protein databank shows that the crystal structures of Ralstonia sp. alcohol dehydrogenase [24] (PDB:4BMS), Bacillus subtilis FabG [18] (PDB:4NBU) and the uncharacterized SDR MSMEG_2598 (PDB:4WEC) from M. smegmatis (unpublished) possess the highest scores, sharing 42, 37 and 37% primary sequence identity with MSMEG_6753, respectively ... |
| 6 | 3p0x | - | https://www.sciencedirect.com/science/article/pii/S0166685120300992 | Characterisation and structural analysis of glyoxylate cycle enzymes of Teladorsagia circumcincta | 2020 | S Umair, C Bouchet, N Palevich, HV Simpson- Molecular and Biochemical, 2020 - Elsevier | to compare the TciICL and TciMS protein sequences with deposited structures in the Protein Data Bank ( PDB ) Locations are shown of the C- and N-terminus in the predicted tertiary structure of TciICL C) and TciMS in salmon (F) within 4 of the superimposed 3P0X and 3S9Z |
| 7 | 4ege | - | http://scripts.iucr.org/cgi-bin/paper?no5060 | Crystallization and preliminary X-ray diffraction analysis of Xaa-Pro dipeptidase from Xanthomonas campestris | 2014 | A Kumar, VN Are, B Ghosh, U Agrawal - Section F: Structural , 2014 - scripts.iucr.org | ... Although the structures of XPD43 orthologues from the eubacteria Mycobacterium ulcerans, Bacillus anthracis and Thermotoga maritima (PDB entries 4ege , 3q6d and 2zsg ) have been deposited in the PDB by structural genomics consortia, none of these enzymes have been ... |
| 8 | 3ek1 | 3i44 | http://www.sciencedirect.com/science/article/pii/S0009279712002773 | Potential monovalent cation-binding sites in aldehyde dehydrogenases | 2013 | L Gonz?lez-Segura, H Riveros-Rosas? - Chemico-biological Interactions, 2013 - Elsevier | ... Cation-binding sites. Family/organism, PDB code, Resolution (?), Monovalent cation in protein solution/crystallization solution, Intra, Inter, Central-cavity a. ... Brucella melitensis, 3EK1, 2.10, nr/(NH 4 ) 2 SO 4 1 M, Proposed (Water ? Na + ), Proposed (Water ? Na + ) i, No (Lys at 479 ... |
| 9 | 3jst | - | https://www.sciencedirect.com/science/article/pii/S0141813020335261 | Role of tetrachloro-1, 4-benzoquinone reductase in phenylalanine hydroxylation system and pentachlorophenol degradation in Bacillus cereus AOA-CPS1 | 2020 | OA Aregbesola, A Kumar, MP Mokoena- International Journal of, 2020 - Elsevier | Three-dimensional structure and homology modelling of the protein were predicted by submitting the amino acid sequence at the SWISS-MODEL tool at The modelled PDB files were submitted to an online tool (PDBsum) for determining the structural summary [34]. 2.12 ... and sequence identity of 59%, followed by PCD/DCoH (PDB: 3JST) from Brucella melitensis, |
| 10 | 4fkx | - | https://www.sciencedirect.com/science/article/pii/S0006291X1930155X | Characterization of crystal structure and key residues of Aspergillus fumigatus nucleoside diphosphate kinase | 2019 | Y Hu, X Jia, Z Lu, L Han- Biochemical and biophysical research, 2019 - Elsevier | was determined by molecular replacement (MR) method using Trypanosoma brucei NDK (TbNDK, PDB code 4FKX ) as starting The PDB accession code was 6AGY 1230-1247. Google Scholar. [9] L. Moynie, MF Giraud, F. Georgescauld, I. Lascu, A. DautantThe structure of the |