We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 4X00 | 2014 | 2 |
| 4NOZ | 2013 | 2 |
| 6PTH | 2019 | 2 |
| 6B1L | 2018 | 2 |
| 6NBO | 2018 | 2 |
| 6NFE | 2019 | 2 |
| 4XFD | 2015 | 2 |
| 5IDX | 2016 | 2 |
| 3HZU | 2009 | 2 |
| 4OO0 | 2014 | 2 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5upg | - | https://www.sciencedirect.com/science/article/pii/S0141813018328204 | The inhibitory and binding studies of methyl-sulfone hydroxamate based inhibitors against LpxC from drug resistant Moraxella catarrhalis using biophysical | 2018 | A Sharma, V Kumar, S Pratap, P Kumar- International journal of biological, 2018 - Elsevier | Similarly, a crystal structure of LpxC from P. aeruginosa complexed with the LpxC-4 inhibitors (PDB ID: 5UPG) have also shown the interactions of ligand at these two sites. |
| 2 | 3sdo | - | https://www.frontiersin.org/articles/10.3389/fmicb.2018.00231 | Structural and Biochemical Characterization of BdsA from Bacillus subtilis WU-S2B, a Key Enzyme in the 4S Desulfurization Pathway | 2018 | T Su, J Su, S Liu, C Zhang, J He, Y Huang- Frontiers in, 2018 - frontiersin.org | This work combined with our previous structure of DszC provides a systematic structural basis for the The native BdsA structure was resolved by molecular replacement using Phaser from the CCP4 suit of programs (Winn et al., 2011) with LadA ( PDB entry 3B9N) as the |
| 3 | 3und | - | http://scripts.iucr.org/cgi-bin/paper?tt5043 | Structure of 2-keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase from Pseudomonas aeruginosa | 2013 | SK Nelson, A Kelleher, G Robinson? - Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 2013 - scripts.iucr.org | ... Biochemistry, 40, 6326-6334.] ), with 69% sequence similarity, Burkholderia pseudomallei (PDB entry 3und ; Seattle Structural Genomics Center for Infectious Disease, unpublished work), with 64% sequence identity, and Aquifex aeolicus (PDB entry 1fwt ; Ackerman & Gatti ... |
| 4 | 4eqy | - | http://pubs.acs.org/doi/abs/10.1021/acs.biochem.5b00720 | Structures of Pseudomonas aeruginosa LpxA Reveal the Basis for Its Substrate Selectivity | 2015 | EW Smith, XJ Zhang, C Behzadi, LD Andrews - Biochemistry, 2015 - ACS Publications | ... Superimposition of all three monomers from the biologically relevant homotrimer, showing loops L1 and L2. (D) P. aeruginosa LpxA monomer superimposed onto eight ortholog LpxA monomeric structures (E. coli (PDB ID: 1LXA), B. thailandensis (PDB ID: 4EQY), ... |
| 5 | 3obk | - | http://pubs.acs.org/doi/abs/10.1021/acs.accounts.6b00414 | The Remarkable Character of Porphobilinogen Synthase | 2016 | EK Jaffe - Accounts of Chemical Research, 2016 - ACS Publications | ... (c) The pro-octamer dimer of T. gondii PBGS (PDB id 3obk) includes the ... (d) Three subunits ofthe yeast PBGS octamer (PDB id 1ohl ... All known PBGSs are homomultimers, and various multimersdiffer in quaternary structure interactions that govern enzymatic activity by impinging ... |
| 6 | 4qhq | - | https://link.springer.com/protocol/10.1007/978-1-4939-8736-8_12 | Navigating Among Known Structures in Protein Space | 2019 | A Narunsky, N Ben-Tal, R Kolodny- Computational Methods in Protein, 2019 - Springer | evolutionary history, with sequences that diverged beyond the point where one can identify their common ancestry; for example, the SCOP fold, CATH Architecture , and ECOD As both neighbors ( pdb 4qhq and pdb 3qwl) have a bound methionine in their PDB structure (Fig |
| 7 | 4g6c | - | http://scitation.aip.org/content/aip/journal/jcp/143/20/10.1063/1.4936132 | Multiscale Gaussian network model (mGNM) and multiscale anisotropic network model (mANM) | 2015 | K Xia, K Opron, GW Wei - The Journal of chemical physics, 2015 - scitation.aip.org | ... More importantly, we reveal intrinsic multiscale behavior in protein structures. ... B-factor), ie, theatomic mean-square displacement, obtained in structure determination by ... depends the crystalenvironment, solvent type, data collection condition, and structural refinement procedure ... |
| 8 | 4dz4 | - | https://www.frontiersin.org/articles/10.3389/fpls.2020.00987/full?report=reader | The neighboring subunit is engaged to stabilize the substrate in the active site of plant arginases | 2020 | B Sekula- Frontiers in plant science, 2020 - frontiersin.org | It is worth noting that the structure of agmatinase from Deinococcus radiodurans ( PDB ID: 1WOG) (Ahn et al., 2004) is ID: 3LHL), agmatinase from Thermoplasma volcanium (TvAGM, PDB ID: 3PZL), and agmatinase from Burkholderia thailandensis (BtAGM, PDB ID: 4DZ4 ) |
| 9 | 4pfz | - | https://www.sciencedirect.com/science/article/pii/S0006291X19308988 | Structural insights into a maleylpyruvate hydrolase from sphingobium sp. SYK-6, a bacterium degrading lignin-derived aryls | 2019 | H Hong, H Seo, KJ Kim- Biochemical and biophysical research, 2019 - Elsevier | delta-isomerase from Mycobacterium smegmatis strain ATCC 700084 ( PDB code 4PFZ , 41% sequence The model building and structure refinement were performed as in SsMPH Apo type Mn 2+ -pyruvate have been deposited in the Protein Data Bank with PDB codes 6JVV |
| 10 | 3dah | - | http://link.springer.com/article/10.1007/s00792-014-0726-x | Structure of dimeric, recombinant Sulfolobus solfataricus phosphoribosyl diphosphate synthase: a bent dimer defining the adenine specificity of the substrate ATP | 2015 | RW Andersen, LL Leggio, B Hove-Jensen, A Kadziola - Extremophiles, 2015 - Springer | ... 1 3 structure of PRPP synthase of the thermophilic, metha- nogenic archaeon M. jannaschii istetrameric and appears to be built by two dimers ... 2007), and the Gram-negative Betaproteobacterium Burkholderia (Pseudomonas) pseudomallei (PDB code 3DAH) have hex ... |