We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 4XI8 | 2016 | 3 |
| 8DUY | 2022 | 3 |
| 4ED4 | 2012 | 3 |
| 4PY3 | 2015 | 3 |
| 8SLG | 2023 | 3 |
| 4K73 | 2013 | 3 |
| 3MR1 | 2010 | 3 |
| 5VP5 | 2017 | 3 |
| 4WNY | 2014 | 3 |
| 4OT8 | 2014 | 3 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5kak | - | https://books.google.com/books?hl=en&lr=&id=x6RMDwAAQBAJ&oi=fnd&pg=PR8&dq=%225KA... | Protein-protein and domain-domain interactions | 2018 | P Kangueane, C Nilofer - 2018 - books.google.com | 1.10) structures It is important to under- stand the physical and chemical features of amino acids to understand protein folding, structure , function, and 1.4 A covalent bond is illustrated using cysteine with corresponding bond length 1.5 Structural Motifs Proteins are made of |
| 2 | 3ixc | - | https://www.frontiersin.org/articles/10.3389/fmicb.2020.00742/full?report=reader | Crystal structure and active site engineering of a halophilic -carbonic anhydrase | 2020 | M Vogler, R Karan, D Renn, A Vancea- Frontiers in, 2020 - frontiersin.org | (C) The surface potential of CA_D compared to mesophilic -CA homologs (Escherichia coli, 3tio; Salmonella enterica, 3r3r; Anaplasma phagocytophilum, 3ixc ; Bacillus cereus, 1xhd (A) CA_D (crystal structure ), (B) Cam (crystal structure ) from M. thermophila ( PDB ID: 1qrg |
| 3 | 4xgi | - | https://link.springer.com/content/pdf/10.1007/s10989-019-09886-4.pdf | Homology Modeling and Molecular Docking Studies of Glutamate Dehydrogenase (GDH) from Cyanobacterium Synechocystis sp. PCC 6803 | 2019 | O Haghighi, S Davaeifar, HS Zahiri, H Maleki- International Journal of, 2019 - Springer | aLigand name in structure : NAD-507 Docking pose number Reference ligand in crystallography structure (ligand name and pdb code) NADH NADPH AKG Glutamate 1V9L 1HWYa 5GUD 5IJZ 1HWY 4XGI 6DHM 3AOG Pose 01 4.57 3.48 5.74 5.75 2.22 2.11 1.72 1.58 |
| 4 | 3r2v | - | https://www.sciencedirect.com/science/article/pii/B9780323857307000266 | Antimicrobial (viral, bacterial, fungal, and parasitic) mechanisms of action of boron-containing compounds | 2023 | ED Farfn-Garca, A Kilic, J Garca-Machorro- Viral, Parasitic, Bacterial, 2023 - Elsevier | in a complex on the polymerase basic protein 2 of the influenza virus ( PDB code: 3R2V ). in the Protein Data Bank ( PDB ). The obtained crystal structures allow the analysis of BCC with |
| 5 | 3obk | 3sth, 3ujh | http://www.tandfonline.com/doi/abs/10.1517/17460441.2012.729036 | Screening for small molecule inhibitors of Toxoplasma gondii | 2012 | S Kortagere - Expert opinion on drug discovery, 2012 - Taylor & Francis | ... A screening for protein targets in T. gondii, for which a crystal structure is available and a ...3OBK Crystal structure of delta-aminolevulinic acid dehydratase (porphobilinogen synthase) from T. gondii ME49 in complex with the reaction product porphobilinogenr ... |
| 6 | 5koi | - | https://www.sciencedirect.com/science/article/pii/S1875536421600444 | Bufotenine and its derivatives: synthesis, analgesic effects identification and computational target prediction | 2021 | Z Chao, C Min, SUN Shan-Liang, W Jiao-Jiao- Chinese Journal of, 2021 - Elsevier | Class Target PDBa Glideb MMGBSA Class Target PDB Glide MMGBSA Class Target PDB Glide MMGBSA mGLuR5 4OO9 0.52 37.15 GLP1 3IOL 4.50 23.75 NaV1.7 5KOI 2.85 25.53 silver chlor- ide is added for substitution to obtain a stable structure of compound 6 with |
| 7 | 3l56 | - | http://www.hindawi.com/journals/irt/2013/645348/abs/ | 3D Molecular Modelling Study of the H7N9 RNA-Dependent RNA Polymerase as an Emerging Pharmacological Target | 2013 | D Vlachakis, A Karozou, S Kossida - Influenza research and treatment, 2013 - hindawi.com | ... The sequence alignment and the blastp query that followed revealed that the PA domain was available in the PDB databank. ... entry: 4ENF), and the crystal structure of the large C-terminal domain of the polymerase basic protein 2 from influenza A virus (RCSB entry: 3L56). ... |
| 8 | 4ed9 | - | http://link.springer.com/article/10.1007/s10545-013-9632-0 | C7orf10 encodes succinate-hydroxymethylglutarate CoA-transferase, the enzyme that converts glutarate to glutaryl-CoA | 2014 | S Marlaire, E Van Schaftingen… - Journal of inherited …, 2014 - Springer | ... Electrophoresis was performed with ≈50 μg protein for the Coomassie Blue stained gel and ≈5 μg (soluble proteins) or ≈1 ... The closest homologue of human C7orf10 for which a structure is available (4ED9) shares more than 40 % se- quence identity with the mammalian ... |
| 9 | 5idw | - | https://febs.onlinelibrary.wiley.com/doi/abs/10.1002/1873-3468.12683 | Structure and characterization of a NAD(P)Hdependent carbonyl reductase from Pseudomonas aeruginosa PAO1 | 2017 | S Li, X Teng, L Su, G Mao, Y Xu, T Li, R Liu- FEBS, 2017 - Wiley Online Library | NADP binding induces structural changes including the ordering of the active site specificity loop, and the presence of small molecules The native PA4079 structure was determined by molecular replacement with phaser 14 in the phenix suite 15 using PDB entry 3WXB |
| 10 | 4h3z | 4odj | http://www.sciencedirect.com/science/article/pii/S0959440X1630166X | How to fold intricately: using theory and experiments to unravel the properties of knotted proteins | 2017 | SE Jackson, A Suma, C Micheletti - Current Opinion in Structural Biology, 2017 - Elsevier | ... Despite the early evidence of a shallowly knotted carbonic anhydrase structure [1 and 2], the ...Homodimeric entries 3BJX and 4H3Z are accordingly represented by chains B instead of thedefault ... The complete list of knotted PDB entries, including a few where knots are likely ... |