We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3EZ4 | 2008 | 2 |
| 2LXF | 2012 | 2 |
| 4JQP | 2013 | 2 |
| 5VM1 | 2017 | 2 |
| 8SF3 | 2023 | 2 |
| 7SOA | 2022 | 2 |
| 4JE1 | 2013 | 2 |
| 5ENU | 2015 | 2 |
| 4J5U | 2013 | 2 |
| 5DLC | 2015 | 2 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4pfz | - | https://www.sciencedirect.com/science/article/pii/S0006291X19308988 | Structural insights into a maleylpyruvate hydrolase from sphingobium sp. SYK-6, a bacterium degrading lignin-derived aryls | 2019 | H Hong, H Seo, KJ Kim- Biochemical and biophysical research, 2019 - Elsevier | delta-isomerase from Mycobacterium smegmatis strain ATCC 700084 ( PDB code 4PFZ , 41% sequence The model building and structure refinement were performed as in SsMPH Apo type Mn 2+ -pyruvate have been deposited in the Protein Data Bank with PDB codes 6JVV |
| 2 | 3rr2 | - | http://www.sciencedirect.com/science/article/pii/S1570963913003543 | Biochemical properties of nematode< i> O</i>-acetylserine (thiol) lyase paralogs imply their distinct roles in hydrogen sulfide homeostasis | 2013 | R Vozdek, A Hn?zda, J Krijt, L ?er?, V Ko?ich - Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 2013 - Elsevier | ... First, their amino acid sequences, together with sequences of OAS-TL (PDB ID: 1D6S, 1FCJ, 1O58, 1VE1, 1Y7L, 1Z7W, 2EGU, 2JC3, 2PQM, 2Q3D, 2V03 and 3RR2) and CBS (PDB ID: 1JBQ and 3PC3) were aligned using MUSCLE 3.8.31 [23]. ... |
| 3 | 3qbp | 3qh8 | http://dl.acm.org/citation.cfm?id=2213792 | Protein surface characterization using an invariant descriptor | 2011 | ZA Deeb, DA Adjeroh, BH Jiang - Journal of Biomedical Imaging, 2011 - dl.acm.org | ... 1. Introduction The Protein Data Bank (http://www.pdb.org/pdb/home/ home.do) (PDB) currently has more than 3000 protein struc- tures classified as uncharacterized or as proteins of unknown function. This is about 5% of the total structures in PDB. ... |
| 4 | 4ix8 | - | http://www.sciencedirect.com/science/article/pii/S2211320714000128 | Tyrosine aminotransferase from< i> Leishmania infantum</i>: A new drug target candidate | 2014 | MA Moreno, A Alonso, PJ Alcolea, A Abramov - International Journal for , 2014 - Elsevier | ... code: 3DYD) and the mouse TAT (PDB code: 3PDX) ( Mehere et al., 2010). Recently, the structure of LiTAT has been solved to 2.3 (PDB code: 4IX8) ( Moreno et al., 2014). On the basis of this background, the aim of the work is ... |
| 5 | 4dgq | - | http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0169540 | Crystal Structure and Functional Characterization of an Esterase (EaEST) from Exiguobacterium antarcticum | 2017 | CW Lee, S Kwon, SH Park, BY Kim, W Yoo, BH Ryu - PloS one, 2017 - journals.plos.org | ... PDB code 3FOB), haloperoxidase (PDB code 1A8S), chloroperoxidase (PDB code 4DGQ), andesterase ... Comparison of EaEST structure with that of PfEST. Structural comparison usingsuperimposition between EaEST and PfEST (PDB code 3HI4, acetate-bound form) shows ... |
| 6 | 7jva | - | https://www.nature.com/articles/s41467-023-35949-8.pdf | Structural basis for a conserved neutralization epitope on the receptor-binding domain of SARS-CoV-2 | 2023 | KYA Huang, X Chen, A Mohapatra- Nature, 2023 - nature.com | PDB code 7M7B for 3D11 and 7JVA for S2A4. c IS-9A and similar antibodies extend their footprints upwards and contact residue 408 and the residues 502-504 region. |
| 7 | 4nps | - | https://www.pnas.org/content/118/12/e2023245118.short | Structural basis for selective AMPylation of Rac-subfamily GTPases by Bartonella effector protein 1 (Bep1) | 2021 | N Dietz, M Huber, I Sorg, A Goepfert- Proceedings of the, 2021 - National Acad Sciences | Skip to main content. Main menu. Home; Articles: Current; Special Feature Articles - Most Recent; Special Features; Colloquia; Collected Articles; PNAS Classics; List of Issues. Front Matter: Front Matter Portal; Journal Club. News: For |
| 8 | 3ndn | - | https://www.nature.com/articles/s42003-025-08051-6 | A pH-dependent direct sulfhydrylation pathway is required for the pathogenesis of Mycobacterium tuberculosis | 2025 | VK Nain, V Barik, M Pandey, M Pareek- Communications, 2025 - nature.com | For system preparation, the crystal structure of putative O-succinyl homoserine sulfhydrylase of M. tuberculosis was retrieved from RCSB PDB 56 ( PDB -ID: 3NDN 57 ). The protein has 4 |
| 9 | 5ts2 | 3pxu | https://www.sciencedirect.com/science/article/pii/S0141813019351451 | Structural and biochemical studies of phosphopantetheine adenylyltransferase from Acinetobacter baumannii with dephospho-coenzyme A and coenzyme A | 2019 | A Gupta, PK Singh, P Sharma, P Kaur, S Sharma- International journal of, 2019 - Elsevier | pseudolamelli (BpPPAT, PDB ID: 3PXU), Mycobacterium abcessus (MaPPAT, PDB ID: 5O08) and Pseudomonas aeruginosa (PaPPAT, PDB ID: 5TS2 Therefore, structure of enzyme, PPAT must be determined from the bacterium against whom specific drug has to be designed |
| 10 | 3sdo | - | http://onlinelibrary.wiley.com/doi/10.1111/mmi.13363/full | Structural and biochemical characterization of EDTA monooxygenase and its physical interaction with a partner flavin reductase | 2016 | SY Jun, KM Lewis, B Youn, L Xun - Molecular , 2016 - Wiley Online Library | ... E. Open (green) and closed (cyan) form lid domains are aligned to show conservation of secondary structure of both ... Structural homologues of EmoA. ... to EmoA showed that the highest match was NTA monooxygenase (NmoA) from Burkholderia pseudomallei ( PDB : 3SDO ) with ... |