We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6MZA | 2018 | 1 |
| 4WJM | 2014 | 1 |
| 5UZH | 2017 | 1 |
| 5UXW | 2018 | 1 |
| 4O0K | 2014 | 1 |
| 5JYD | 2016 | 1 |
| 5U8P | 2017 | 1 |
| 8SC0 | 2023 | 1 |
| 4E4T | 2012 | 1 |
| 5TEW | 2016 | 1 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5cy4 | - | https://www.tandfonline.com/doi/abs/10.1080/07391102.2019.1643786 | Structural and dynamic studies provide insights into specificity and allosteric regulation of ribonuclease as, a key enzyme in mycobacterial virulence | 2019 | L Calvanese, F Squeglia, M Romano- Structure and, 2019 - Taylor & Francis | Despite this, its structure , a dimeric molecule with each monomer adopting a compact entry 4OKE) from Mycobacterium tuberculosis against the Protein Data Bank ( PDB ) using the Coxiella burnetii (Coxbu) (3TR8, Z-score 13.8), Acinetobacter baumannii (Aciba) ( 5CY4 , Z-score |
| 2 | 4dz6 | - | https://www.degruyter.com/view/j/pac.2017.89.issue-5/pac-2016-0202/pac-2016-0202... | How to name atoms in phosphates, polyphosphates, their derivatives and mimics, and transition state analogues for enzyme-catalysed phosphoryl transfer reactions | 2017 | GM Blackburn, J Cherfils, GP Moss- Pure and Applied, 2017 - degruyter.com | Check Out. Menu: Subjects: Architecture and Design; Arts; Asian and Pacific Studies; Business and Economics; Chemistry; Graphical representation standards for chemical structure diagrams (IUPAC Recommendations 2008) by Brecher, Jonathan; Measurement of cellulase |
| 3 | 6nae | - | https://www.preprints.org/manuscript/202003.0183 | Two Achilles' Heels of the Ebolavirus Glycoprotein? | 2020 | W Li - 2020 - preprints.org | in complex with a broadly neutralizing human antibody, adi-15946 31 6NAE Crystal Structure Structure of ZEBOV GP in complex with 3T0265 antibody 36 6S8J Structure of ZEBOV 1. Experimentally determined Ebolavirus GP structures inside Protein Data Bank ( PDB [128]) as |
| 4 | 3o0m | - | http://jb.asm.org/content/early/2017/06/14/JB.00304-17.abstract | The DNA repair repertoire of Mycobacterium smegmatis FenA includes the incision of DNA 5'flaps and the removal of 5'adenylylated products of aborted nick ligation | 2017 | ML Uson, S Ghosh, S Shuman- Journal of bacteriology, 2017 - Am Soc Microbiol | MSMEG_5871 (Rv0759c) has not been characterized. MSMEG_5028 (Rv1262c) has been characterized structurally (PDB entry 3O0M), but its biochemical activity is uncharted. |
| 5 | 3nfw | - | http://scripts.iucr.org/cgi-bin/paper?dp5021 | Crystallization and preliminary X-ray analysis of the reductase component of p-hydroxyphenylacetate 3-hydroxylase from Acinetobacter baumannii | 2012 | W Oonanant, J Sucharitakul, P Chaiyen? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2012 - scripts.iucr.org | ... All of these structures share the same protein fold and lack the extra C-terminal domain found in C 1 . Recently, the structure of NTA monooxygenase component B from Mycobacterium thermoresistibile (PDB entry 3nfw ; Zhang et al., 2011 [Zhang, Y., Edwards, TE, Begley, DW ... |
| 6 | 4k6f | - | http://search.ebscohost.com/login.aspx?direct=true&profile=ehost&scope=site&auth... | Cloning, expression and molecular modeling of the anthocyanidin reductase (FaANR) gene during strawberry fruit development. | 2017 | PC Mandave, AA Kuvalekar, NL Mantri, MA Islam- Fruits, 2017 - search.ebscohost.com | respectively. Molecular docking study was performed on 3D structure of ANR obtained from homology modeling technique to check binding interaction of template molecule ( PDB ID: 4K6F ) with bound ligand (NADP). Ligand |
| 7 | 3d53 | 3oc6 | http://pubs.rsc.org/en/content/articlehtml/2015/sc/c5sc01065a | Enzyme repurposing of a hydrolase as an emergent peroxidase upon metal binding | 2015 | N Fujieda, J Schätti, E Stuttfeld, K Ohkubo, T Maier… - Chemical …, 2015 - pubs.rsc.org | ... These wild-type proteins or their single mutant isoforms (pdb code: 3D53, 2F99, 1JSY, 1FHI(bearing a Q83E mutation), 1MEJ ... yellow sticks); (B) close-up view of the Cu1 binding site inCu·6-PGLac (PDB code 4TM7 ... The X-ray structure was refined to a resolution of 1.39 Å (Fig. ... |
| 8 | 7l6c | - | https://www.nature.com/articles/s41598-025-97513-2 | Identification of novel inhibitors targeting Mycobacterium abscessus InhA through virtual screening, docking, and molecular dynamic simulations | 2025 | M Abbas, AR Alanzi, KI Sahibzada, M Nawaz- Scientific Reports, 2025 - nature.com | Enoyl-ACP reductase InhA ( PDB : 7L6 C) crystal structures were carefully chosen after an The possible binding modes of the top six hit compounds in the 7L6c binding pocket. Hit |
| 9 | 3ek2 | 3k31, 3k2e | http://scripts.iucr.org/cgi-bin/paper_yard?hv5225 | High-resolution structures of Thermus thermophilus enoyl-acyl carrier protein reductase in the apo form, in complex with NAD+ and in complex with NAD+ and triclosan | 2012 | JM Otero, AJ Noel, P Guardado-Calvo? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2012 - scripts.iucr.org | ... 3f4b ; M. Yu et al., unpublished work) and the bacteria Aquifex aeolicus (PDB entry 2p91 ; Southeast Collaboratory for Structural Genomics and RIKEN Structural Genomics/Proteomics Initiative, unpublished work), Burkholderia pseudomallei (PDB entry 3ek2 ; Seattle Structural ... |
| 10 | 6d9y | - | https://www.nature.com/articles/s41598-024-65627-8 | Crystal structure of l-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a -furanosyl hemiketal of substrates | 2024 | M Akagashi, S Watanabe, S Kwiatkowski, J Drozak- Scientific Reports, 2024 - nature.com | Although the crystal structure of l-KDRDH was unavailable, the closest related structure in the PDB , the hypothetical SDR protein from Burkholderia phymatum ( 6D9Y ; not yet published) |