We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5JC8 | 2016 | 1 |
| 5JRY | 2016 | 1 |
| 5JTK | 2016 | 1 |
| 5JYD | 2016 | 1 |
| 8SBN | 2023 | 1 |
| 5TGD | 2016 | 1 |
| 8SBO | 2023 | 1 |
| 5TQI | 2016 | 1 |
| 5TRT | 2016 | 1 |
| 5TRW | 2016 | 1 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3i4e | 3p0x, 3oq8, 3eol, 3e5b | http://www.hindawi.com/journals/bmri/2015/895453/abs/ | Potential Inhibitors for Isocitrate Lyase of Mycobacterium tuberculosis and Non-M. tuberculosis: A Summary | 2015 | YV Lee, HA Wahab, YS Choong - BioMed Research International, 2015 - hindawi.com | ... 1F8M [5]], Escherichia coli [PDB id: 1IGW [6]], Burkholderia pseudomallei [PDB id: 3I4E (paperunpublished ... crystal structure using Ligand Fit module of Discovery Studio 2.1 software (PDB id1F8M ... View at Scopus; V. Sharma, S. Sharma, KHZ Bentrup et al., “Structure of isocitrate ... |
| 2 | 2kn9 | - | http://journal.iisc.ernet.in/index.php/iisc/article/view/4461 | Redox Proteins of Mycobacterium tuberculosis | 2014 | S Phulera, M Akif, AA Sardesai? - Journal of the Indian Institute of Science, 2014 - journal.iisc.ernet.in | ... The individual structures shown are (A) NrdH, pdb id: 4HS1, (B) FurB, pdb id: 2O03, (C) DipZ,pdb id: 2HYX, (D) FcoT, pdb id: 2PFC, (E) AhpD, pdb id: 1KNC, (F) Mycoredoxin, pdb id: 2LQQ, (G) Rubedoxin C with Zinc atom shown as sphere, pdb id: 2KN9, (H) TrxC, pdb id: 1LU4 ... |
| 3 | 4i1i | 4h7p | https://www.arca.fiocruz.br/handle/icict/34553 | Anlise de aspectos estruturais em imunoinformtica utilizando candidatos vacinais contra Leishmaniose que foram selecionados usando vacinologia reversa. | 2018 | JPL Velloso - 2018 - arca.fiocruz.br | Considering the importance of protein structure in immunological interactions and in vaccine infantum, protein modeling, molecular docking, structural protein disorder. Page 11. LISTA DE QUADROS NCBI - National Center for Biotechnology Information PDB - Protein Data Bank |
| 4 | 4dz4 | 5dle, 4q1t, 4pca, 5bq2, 4lgv, 5kak, 4ghk, 5udf, 4lgo, 3i3f, 3slg, 3swo, 3tk8, 3l0g, 3ld9, 3hm0, 3inn, 3t3w, 5w15, 3dah | https://link.springer.com/chapter/10.1007/978-981-10-7347-2_5 | Homo Multimer Protein Complexes | 2018 | P Kangueane, C Nilofer- Protein-Protein and Domain-Domain Interactions, 2018 - Springer | 3T3W, 3T94, 3VZD, 3WCM, 3WSG, 3WU4, 4BLP, 4BLQ, 4C01, 4C9S, 4D2E, 4DZ4 , 4FLN, 4FZQ Distribution of homo multimer protein complex structures at the protein data bank ( PDB ) Structure of a homo trimer glycosidase (1AM7) from enterobacteria phage lambda is shown |
| 5 | 3md7 | 3urr, 3uw3, 3swo, 3mqd | http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4257144/ | The electrostatic profile of consecutive Cβ atoms applied to protein structure quality assessment | 2013 | S Chakraborty, R Venkatramani, BJ Rao… - …, 2013 - ncbi.nlm.nih.gov | ... PDB, NRes, NStructures, Specificity. ... based on the 'sequence to structure to function' paradigmis contingent upon the availability of its 3D-structure. The rapidly developing field of nextgeneration sequencing has exacerbated the bottleneck of obtaining structural data using ... |
| 6 | 3ido | 3jvi | http://www.sciencedirect.com/science/article/pii/S0006291X14010183 | Atomic resolution crystal structure of< i> Vc</i> LMWPTP-1 from< i> Vibrio cholerae</i> O395: insights into a novel mode of dimerization in the Low molecular Weight | 2014 | S Nath, R Banerjee, U Sen - Biochemical and Biophysical Research , 2014 - Elsevier | ... Several structures of LMWPTP from eukaryotic organism such as human- HCPTPA (PDB: 5PNT) [4], bovine BPTPA (PDB: 1Z12) [5], mouse RPTPA (PDB: 2P4U) [6], yeast LTP1 (PDB: 1D1P) [7] and protozoan parasite Entameoba histolytica EhPtp (PDB: 3IDO) [8] are ... |
| 7 | 7ral | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10769253/ | Broadly neutralizing antibody induction by non-stabilized SARS-CoV-2 Spike mRNA vaccination in nonhuman primates | 2023 | RD Malewana, V Stalls, A May, X Lu, DR Martinez- bioRxiv, 2023 - ncbi.nlm.nih.gov | Our structural studies identified the DH1193 epitope as one of these conserved epitopes on in PDB : 8DPZ, 8DTK, 7RAL . Materials are available with a Materials transfer agreement. |
| 8 | 3grp | 3f9i | http://dx.plos.org/10.1371/journal.pone.0105751 | BdcA, a Protein Important for Escherichia coli Biofilm Dispersal, Is a Short-Chain Dehydrogenase/Reductase that Binds Specifically to NADPH | 2014 | DM Lord, AU Baran, TK Wood, W Peti, R Page - PloS one, 2014 - dx.plos.org | ... Table 2. BdcA structural homologs as determined by DALI and FFAS. ... Indeed, the same loopsare disordered in the protein whose structure is most similar to BdcA, Bartonella henselae FabG(PDB 3GRP; Table 2) and Rickettsia prowazekii FabG (PDB 3F9I; Table 2) [14]. ... |
| 9 | 3nf4 | 3pfd | http://scripts.iucr.org/cgi-bin/paper_yard?fw5406 | Crystallization and preliminary structural analysis of dibenzothiophene monooxygenase (DszC) from Rhodococcus erythropolis | 2013 | X Duan, L Zhang, D Zhou, K Ji, T Ma? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2013 - scripts.iucr.org | ... different protein structures with the highest protein-sequence similarity to DszC [PDB entries 2vig ... 277, 12200-12207.] ), 3nf4 (24% identity; Seattle Structural Genomics Center for Infectious Disease ... and structure factors have been deposited in the Protein Data Bank (Bernstein et ... |
| 10 | 3gvg | 3kxq | http://scholar.google.com/https://bmcbioinformatics.biomedcentral.com/articles/1... | Structural analysis on mutation residues and interfacial water molecules for human TIM disease understanding | 2013 | Z Li, Y He, Q Liu, L Zhao, L Wong - BMC , 2013 - bmcbioinformatics.biomedcentral. | ... Domain. PDB. Organism. Resolution (). #Water. #Atoms. ... 1.162. 0.680. 3GVG. M. tuberculosis.1.55. 41. ... Once the aligned wild type and mutant structures are obtained, the 25 water moleculesin wild type are searched in the mutant structure to determine whether it reappears or not ... |