We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6AMR | 2018 | 1 |
| 6APE | 2017 | 1 |
| 6AQZ | 2017 | 1 |
| 6AR7 | 2017 | 1 |
| 6AUJ | 2017 | 1 |
| 6BNI | 2018 | 1 |
| 4MSO | 2013 | 1 |
| 6CKQ | 2018 | 1 |
| 6CU5 | 2018 | 1 |
| 6CV6 | 2018 | 1 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4hwg | 5dld | http://www.jbc.org/content/293/26/10119.short | The tetrameric structure of sialic acidsynthesizing UDP-GlcNAc 2-epimerase from Acinetobacter baumannii: A comparative study with human GNE | 2018 | TP Ko, SJ Lai, TJ Hsieh, CS Yang, Y Chen- Journal of Biological Chemistry, 2018 - ASBMB | known for at least 10 species ( PDB codes 1F6D, 1O6C, 1V4V, 3BEO, 3DZC, 3OT5, 4HWG , 4NEQ, 5DLD Structural determination and refinement molecular replacement with the PHENIX AutoMR (24) using the previously published human homologue structure ( PDB code 4ZHT |
| 2 | 3qdf | 4qku, 3rr6, 4maq, 4pfz, 3r6o | http://pubs.acs.org/doi/abs/10.1021/acs.biochem.6b00050 | Crystal structures of apo and liganded 4-oxalocrotonate decarboxylase uncover a structural basis for the metal-assisted decarboxylation of a vinylogous -keto acid | 2016 | SL Guimares, JB Coitinho, DMA Costa, SS Arajo - Biochemistry, 2016 - ACS Publications | ... Analysis of the crystal structures implicates a lid domain in substrate binding and suggests roles for ... Representative tertiary and quaternary structures of enzymes from (A) Mus musculus (PDB entry 1QCN(30)) and Burkholderia cenocepacia (PDB entry 4QKU); (B) Sulfolobus solfataricus (PDB entry 2Q18(32)); (C) Mycobacterium marinum (PDB entry 3QDF(39)) ... |
| 3 | 3v7o | 4g50 | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5256280/ | Design of an expression system to enhance MBP-mediated crystallization | 2017 | T Jin, W Chuenchor, J Jiang, J Cheng, Y Li - Scientific , 2017 - ncbi.nlm.nih.gov | ... 25 , GST 26 , TRX 27 , green fluorescent protein (GFP) 28 ,29 , SUMO (pdb: 3V7O and 4G50 ...platform is increasingly appreciated 38 ,39 , the optimal sequence, length, and structure of the ...The death domain superfamily is a structural motif found in many proteins that are involved ... |
| 4 | 4g6c | 4gnv | http://onlinelibrary.wiley.com/doi/10.1002/pro.3166/full | Conformational flexibility of the glycosidase NagZ allows it to bind structurally diverse inhibitors to suppress lactam antibiotic resistance | 2017 | G Vadlamani, KA Stubbs, J Dsir, Y Blriot - Protein , 2017 - Wiley Online Library | ... iMosflm,[31] then scaled and averaged using SCALA (CCP4 package).[32] The BcNagZ:inhibitorcomplex structures were determined by molecular replacement using PHASER (from within thePHENIX package)[33] and a structure of BcNagZ (PDB ID: 4G6C) ...The position of the loop is also consistent with a previous structure of BcNagZ bound to the non-selective N-acetyl-β-glucosaminidase inhibitor 3-acetamido-4,5,6-trihydroxyazepane MM-124 (PDB ID: 4MSS)[9] and the product GlcNAc (PDB ID: 4GNV), indicating that ... |
| 5 | 3kx6 | 3mmt, 3qrh | http://www.scielo.br/scielo.php?pid=S1516-89132017000100410&script=sci_arttext | Molecular And 3D-Structural Characterization Of Fructose-1, 6-Bisphosphate Aldolase Derived From Metroxylon Sagu | 2017 | HA Roslan, M Hossain, J Gerunsin - Brazilian Archives of Biology , 2017 - SciELO Brasil | ... Ten (10) proteins with highly similar structure in protein data bank ( PDB ) were identified by the COFACTOR that includes 1j4e, 1a5c, 1n30, 3kx6 , 2qdh, 3mmt ... The COFACTOR also identified msFBAld structure with the classification EC 4.1.2.13 and predicted that amino ... |
| 6 | 3v7o | 5dvw | https://www.intechopen.com/books/ebola/strategies-for-the-development-of-small-m... | Strategies for the Development of Small Molecule Inhibitors of Ebola Viral Infection | 2016 | S Pleko, Podlipnik - Ebola, 2016 - intechopen.com | ... 2. Structure and action of Ebola virus. ... PDB structures: 2i8b, 3v7o, 5dvw, Target basic patcharound LYS 180 to inhibit the activation of transcription. ... PDB structures: 3vne, 3vnf, 4d9o,4m0q, 4or8, 4u2x, Inhibition of VP24 binding to karyopherin. ... |
| 7 | 4ol9 | 4qji | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7770189/ | Vitamin in the Crosshairs: Targeting Pantothenate and Coenzyme A Biosynthesis for New Antituberculosis Agents | 2020 | HS Butman, TJ Kotz, CS Dowd- Frontiers in Cellular and, 2020 - ncbi.nlm.nih.gov | This review gathers literature reports on the structure /mechanism, inhibitors, and vulnerability of each enzyme in the CoA pathway... To date, there is very little information available for the Mtb PanE homologue (MtPanE). The activity of the protein expressed by the putative panE gene (Rv2573) has not been experimentally verified, although its crystal structure bound to NADP+ and oxamate has been solved (PDB ID: 4OL9). |
| 8 | 4lgv | - | http://onlinelibrary.wiley.com/doi/10.1002/1873-3468.12276/full | The structure of a Trypanosoma cruzi glucose6phosphate dehydrogenase reveals differences from the mammalian enzyme | 2016 | GF Mercaldi, A Dawson, WN Hunter - FEBS letters, 2016 - Wiley Online Library | ... In M. avium and L. mesenteroides G6PDHs (PDB codes 4LGV and 1DPG respectively), thiscysteine is replaced by a valine and an alanine ... The cavity in the T. cruzi enzyme offersopportunities for a structure-based approach to develop novel G6PDH inhibitors. ... |
| 9 | 5cy4 | - | https://febs.onlinelibrary.wiley.com/doi/abs/10.1002/2211-5463.12720 | Characterization of an intertidal zone metagenome oligoribonuclease and the role of the intermolecular disulfide bond for homodimer formation and nuclease activity | 2019 | Y Piotrowski, K Berg, DP Klebl, I Leiros- FEBS open, 2019 - Wiley Online Library | campestris, PDB 1J9A: Haemophilus influenzae, PDB 2IGI: E. coli, PDB 3TR8: Coxiella burnetii, PDB 5CY4 : Acinetobacter baumannii) In the X. campestris Orn structure ( PDB 2GBZ) it is shown that Orn forms a dimer in the crystal From the structural analysis it was shown that |
| 10 | 4j07 | - | https://kuscholarworks.ku.edu/handle/1808/27856 | Strategies to improve the immunogenicity of subunit vaccine candidates | 2018 | Y Wei - 2018 - kuscholarworks.ku.edu | Oligomeric state of lumazine synthase Quaternary structure Organism PDB ID Pentamer 1DI0 2F59 ; 2I0F 2OBX 2O6H 2JFB 1C41 2VI5; 2C9B; 2C92; 2C94; 2C97; 2C9D; 1W19; 1W29 4J07 1EJB 1KYV; 1KYX; 1KYY Decamer Brucella spp |