We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TY0 | 2022 | 0 |
| 7TXZ | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3gaf | - | https://baadalsg.inflibnet.ac.in/jspui/bitstream/10603/196179/12/12_chapter%204.... | Sequence and structural studies of proteins associated with cell wall biosynthesis lipolysis and isoniazid drug resistance in Mycobacterium tuberculosis | 2018 | S Anishetty - 2018 - baadalsg.inflibnet.ac.in | Page 4. 63 of recognizing the native structure out of decoy structures 3D coordinates of Isoniazid-NAD adduct ( PDB : 2IDZ) and Triclosan ( PDB : 3OID) was obtained from PDB Rv0547c Oxidoreductase 5e-35 20% FX6-K - Rv0927c Oxidoreductase 1e-32 23% FX6-K 3GAF 41.32 |
| 2 | 5b8i | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6127630/ | Wen-Luo-Tong Decoction Attenuates Paclitaxel-Induced Peripheral Neuropathy by Regulating Linoleic Acid and Glycerophospholipid Metabolism Pathways | 2018 | F Wu, W Xu, B Deng, S Liu, C Deng, M Wu- Frontiers in, 2018 - ncbi.nlm.nih.gov | The structures of proteins were obtained from the Protein Data Bank ( PDB , https://www.rcsb.org/). Protein structures not available from PDB was homology modeled by (https://www.swissmodel. expasy.org) docking was carried out with Discovery Studio 3.5 (BIOVIA, USA) Table 6 Results of docking Proteins PDB ID pcat1 5b8i *Template of homology modeling. |
| 3 | 4pca | 4oa8, 4oa5 | http://www.sciencedirect.com/science/article/pii/S0968000417301858 | Outer Membrane Protein OmpB Methylation May Mediate Bacterial Virulence | 2017 | DCH Yang, AH Abeykoon, BE Choi, WM Ching- Trends in Biochemical, 2017 - Elsevier | ... on methylation of bacterial OMPs has uncovered novel mechanisms with respect to protein structure and catalytic ... of the 226-residue dimeric O-methyltransferase have been determined in its apo form ( PDB ID:4OA8) and in complex with AdoMet (4OA5) or AdoHcy ( 4PCA ). ... |
| 4 | 3p96 | - | http://onlinelibrary.wiley.com/doi/10.1002/prot.24101/full | Crystal structure of tandem ACT domain-containing protein ACTP from Galdieria sulphuraria | 2012 | E Bitto, DJ Kim, CA Bingman, HJ Kim? - Proteins: Structure, Function, and Bioinformatics, 2012 - Wiley Online Library | ... domains of other proteins including glycine cleavage system transcriptional regulator GcvR (PDB id: 1u8s; unpublished data), formyltetrahydrofolate deformylase (PDB id: 3nrb, 3n0v, and 3lou; unpublished data), and phosphoserine phosphatase SerB (PDB id: 3p96).16 The ... |
| 5 | 4lfy | - | https://tspace.library.utoronto.ca/handle/1807/70867 | STRUCTURE DETERMINATION AND BIOCHEMICAL CHARACTERIZATION OF NOVEL HUMAN UBIQUITIN-LIKE DOMAINS. | 2015 | RS Doherty - 2015 - tspace.library.utoronto.ca | ... Table 3.2: Secondary structure elements of NFATc2IP, ubiquilin-1, ubiquitin and SUMO1/2/3. ...Table 3.4: UIM:ubiquitin complexes deposited in the PDB, along with UIM sequence ... ubiquitin,along with the number of supporting publications and supporting structural complexes that ... |
| 6 | 6mb1 | 6mb0, 6may, 6maz | https://spiral.imperial.ac.uk/handle/10044/1/85451 | N-myristoyltransferase inhibitor binding mode and phenotype in the malarial parasite. | 2019 | AC Schlott - 2019 - spiral.imperial.ac.uk | lacks myristoylation and instead contains a hydro- phobic N-terminal sequence interacting with the Golgi membrane; its location resembles the distribution of GRASP1, but its structure may result 2010) N-Myristoyltransferase from Leishmania donovani: Structural and Functional ... One of them is the aminomethylindazole series including compounds IMP-0917 (PDB: 5O6H) (Mousnier et al. 2018), and IMP-1002 (PDB: 6MB1) (Schlott et al. 2019) |
| 7 | 3e7d | - | http://www.freepatentsonline.com/y2016/0122392.html | POLYPEPTIDES FOR USE IN SELF-ASSEMBLING PROTEIN NANOSTRUCTURES | 2016 | D Baker, JB Bale, NP King - US Patent , 2016 - freepatentsonline.com | ... panel B) comprise 12 pentamers (dark grey) and 30 dimers (light grey), and the I32-28 designmodel and crystal structure (panel C ... Starting proteins were those derived from pentameric, trimeric,and dimeric crystal structures from the Protein Data Bank (PDB), along with a ... |
| 8 | 2lol | 2lky, 2kwl | http://www.crcnetbase.com/doi/pdfplus/10.1201/9781315368863-14 | Dynamic Analysis of Backbone-Hydrogen-Bond Propensity for Protein Binding and Drug Design | 2016 | CA Menndez, SR Accordino - Biopolymers for , 2016 - crcnetbase.com | ... binding (Bogan and Thorn 1998; Li and Liu 2009) propose that the structure of the ... layers of aset of complete (without missing residues) proteins without ligands (PDB IDs: 1AHO ... 2L4V, 2L5R,2L7W, 2LA1, 2LAO, 2LCU, 2LFN, 2LHC, 2LHS, 2LJM, 2LKB, 2LKY, 2LOL, 2LPK, 2PNE ... |
| 9 | 3enk | - | http://scripts.iucr.org/cgi-bin/paper?cb5020 | Structure and in silico substrate-binding mode of ADP-L-glycero-D-manno-heptose 6-epimerase from Burkholderia thailandensis | 2013 | MS Kim, A Lim, SW Yang, J Park, D Lee? - Acta Crystallographica Section D Biological Crystallography, 2013 - scripts.iucr.org | ... complexed with six different types of substrate have been deposited in the Protein Data Bank (Table 2 ... Cov ++ (%), Cavity volume (? 3 ), Molecular volume (? 3 ), Cavity/molecule, RelatedPDB entries. ... B. pseudomallei (3enk ), UDP- -D-glucose, 7.13, 2.72, 22, 37, 93, 830.8, 181.5, ... |
| 10 | 4iuj | - | https://ecommons.udayton.edu/uhp_theses/264/ | Toward a PA-Inhibitor Complex Crystal System: Influenza Polymerase Acidic Protein Fusion Constructs and Protein Expression | 2020 | R Kramb - 2020 - ecommons.udayton.edu | Figure 5 b (right) apo-PA crystal packing. PA ( PDB ID: 4IUJ ) is rendered as a surface, and a loop interest, our approach is to create different protein fusions of PA that will alter the crystal packing structure of PA, which could allow the visualization of the apo protein through |