We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TY0 | 2022 | 0 |
| 7TXZ | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3o0m | - | https://edoc.ub.uni-muenchen.de/21623/ | Evolutionary coupling methods in de novo protein structure prediction | 2016 | S Seemayer - 2016 - edoc.ub.uni-muenchen.de | On homomeric proteins, intermolecular couplings (red) have to be disentangled from intramolecular couplings (yellow) for de novo structure prediction to succeed (representative contacts mapped on PDB code 3O0M) |
| 2 | 3pgz | 5j3b | https://repositorio.unesp.br/handle/11449/153962 | Caracterizao molecular da atividade de interao da protena RPA-1 com os telmeros de Leishmania spp. | 2018 | GAGD Santos - 2018 - repositorio.unesp.br | Recently, using molecular dynamics simulations we have shown that the tertiary structure of LaRPA-1 differs from human and yeast RPA-1 and A structural search for proteins that share with the TEP domains of protein-DNA interaction, showed that in the genome of Leishmania |
| 3 | 2kn9 | - | https://www.biorxiv.org/content/10.1101/2020.10.27.356691v1.abstract | A new twist of rubredoxin function in M. tuberculosis | 2020 | T Sushko, A Kavaleuski, I Grabovec, A Kavaleuskaya- bioRxiv, 2020 - biorxiv.org | 21]. Previously, a zinc-substituted RubB structure was solved by NMR ( PDB ID: 2KN9 ). Pairwise . In the NMR model, residues at C and N termini show backbone variability, while the rest of the structure remain almost unperturbed |
| 4 | 4jpd | - | http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0184961 | SAXS and stability studies of iron-induced oligomers of bacterial frataxin CyaY | 2017 | M Fekry, W Alshokry, P Grela, M Tchrzewski- PloS one, 2017 - journals.plos.org | ... The crystal structure of the CyaY monomer ( PDB entry 1EW4) was used for building a model, which was assumed to be a ... The ratio between the emission intensities at 350 nm and 330 nm (F350/F330) was used to track the structural changes with increasing temperature. ... |
| 5 | 3ue9 | - | http://scripts.iucr.org/cgi-bin/paper?S1744309113021921 | Purification, crystallization and preliminary X-ray analysis of adenylosuccinate synthetase from the fungal pathogen Cryptococcus neoformans | 2013 | RD Blundell, SJ Williams, CA Morrow? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2013 - scripts.iucr.org | ... Zhou, S. Peterson, W. Anderson & A. Joachimiak, unpublished work), Campylobacter jejuni (43% identity; PDB entry 3r7t ; Center for Structural Genomics of Infectious Diseases, unpublished work) and Burkholderia thailandensis (40% identity; PDB entry 3ue9 ; Seattle Structural ... |
| 6 | 6nb8 | - | https://saudijournals.com/media/articles/SIJB_36_143-153.pdf | Drug Targets for Corona Virus (COVID-19): A Systematic Review | 2020 | K Jayakumar - 2020 - saudijournals.com | to neutralize it, and their structures are also available ( PDB IDs: 6NB6, 6NB7, and 6NB8 .The monoclonal antibody, m396, has a competitive role for RBD binding ( PDB ID: 2DD8 However, the structure is highly variable among different members of the CoV family |
| 7 | 3oa1 | - | https://edoc.ub.uni-muenchen.de/23348/1/Wachowius_Marco.pdf | The rabies virus phosphoprotein: novel targets and functions involved in interferon antagonism | 2016 | M Wachowius - 2016 - edoc.ub.uni-muenchen.de | After attachment to the extracellular target structure Structural data available for the dimerization domain ( PDB ID 3L32) and C- terminal domain ( PDB ID 3OA1 ) were visualized with Cn3D software by NCBI B) Overview over the RABV P trafficking signals |
| 8 | 3gaf | - | http://www.jpbms.info/index.php?option=com_docman&task=doc_download&gid=64&Itemi... | Computational analysis of the SAG 13 gene encoding an alcohol dehydrogenase | 2010 | M Adhikary, S Ganguli, HJ Chakraborty, P Basu et al. - Journal of Pharmaceutical and Biomedical Sciences - jpbms.info | ... protein structure to be used as template using BLAST (Basic Local Alignment Search Tool) (1) against PDB (Protein Data Bank). The sequence with maximum identity and less e value was chosen and used as the reference structure for homology modeling. [3GAF, 1AE1 and ... |
| 9 | 6tys | - | https://www.biorxiv.org/content/10.1101/2021.07.09.451785.abstract | Study of Basic Local Alignment Search Tool (BLAST) and Multiple Sequence Alignment (Clustal-X) of Monoclonal mice/human antibodies | 2021 | IV Ferrari, P Patrizio- bioRxiv, 2021 - biorxiv.org | zone between 150-210 residues amino acids; with the exception of ID PDB 3I9G-3W9D 6TYS : (A potent cross-neutralizing antibody targeting the fusion glycoprotein inhibits Nipah virus and Antibodies all have the same basic structure consisting of two heavy and two light |
| 10 | 3u04 | - | https://books.google.com/books?hl=en&lr=&id=odPbDwAAQBAJ&oi=fnd&pg=PP1&dq=%223U0... | Drug Repurposing in Cancer Therapy: Approaches and Applications | 2020 | KKW To, WCS Cho - 2020 - books.google.com | Page 1. Drug RE pu irposir g in Approaches and Applications Edited by Kenneth K. W. To William CS Cho MEDIA BUSINESS WORLD TUORK $60CM WORLD so OH HC E ENT N-Cro C CI AP CH3 Page 2. DRUG REPURPOSING IN CANCER THERAPY Page 3 |