We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 8CTR | 2022 | 0 |
| 8CU5 | 2022 | 0 |
| 8CU9 | 2022 | 0 |
| 4O8K | 2014 | 0 |
| 7U5Q | 2022 | 0 |
| 7U5F | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3i4e | - | http://www.jbc.org/content/early/2018/07/20/jbc.RA118.004514.short | Gluconeogenic precursor availability regulates flux through the glyoxylate shunt in Pseudomonas aeruginosa | 2018 | A Crousilles, SK Dolan, P Brear, DY Chirgadze- Journal of Biological, 2018 - ASBMB | domain of each chain (Figure S7), suggesting that catalysis is accompanied by structural rearrangements Comparison of the P. aeruginosa IDH active site architecture with that of ICD in the The structure ( PDB ; 5M2E), solved to 2.7 resolution, was very similar to that reported for |
| 2 | 3meq | - | http://www.springerlink.com/index/y386x24r70618558.pdf | Asymmetric reduction of diketones by two Gluconobacter oxydans oxidoreductases | 2012 | P Schweiger, H Gross, J Zeiser? - Applied Microbiology and Biotechnology, 2012 - Springer | ... identity, >70 % similarity) to other alcohol dehydrogenase with known 3-D structure, for example, to zinc-dependent alcohol dehydrogenases from Brucella suis (PDB, 3MEQ_A), Pseudomonas ... 2004), 3MEQ from B. suis, and 1RJW from G. stearthermophilus (Ceccarelli et al. ... |
| 3 | 5unb | - | https://www.biorxiv.org/content/early/2018/12/01/480194.abstract | Universal architectural concepts underlying protein folding patterns | 2018 | A Lesk, R Subramanian, L Allison, D Abramson- bioRxiv, 2018 - biorxiv.org | to give proteins their intricate three-dimensional shapes and folding patterns (tertiary structure ) Unravelling protein architecture and discovering the relationship among these three major levels of of protein folding patterns have revealed recurrent themes at all structural levels (2 |
| 4 | 4qq7 | - | http://www.nature.com/articles/srep19498 | Structural understanding of the recycling of oxidized ascorbate by dehydroascorbate reductase (OsDHAR) from Oryza sativa L. japonica | 2016 | H Do, IS Kim, BW Jeon, CW Lee, AK Park, AR Wi - Scientific Reports, 2016 - nature.com | ... C with an RMSD of 2.07 ) and the putative stringent starvation protein A from Burkholderiacenocepacia (PDB code 4QQ7) (122 aligned C ... The dimer structure of CLIC1 has a largehydrophobic surface, which can be used for membrane incorporation and chloride ion ... |
| 5 | 3u03 | - | http://link.springer.com/article/10.1007/s00894-015-2897-5 | Iron depletion strategy for targeted cancer therapy: utilizing the dual roles of neutrophil gelatinase-associated lipocalin protein | 2016 | HC Tang, PC Chang, YC Chen - Journal of molecular modeling, 2016 - Springer | ... and 3D crystal conformation of human NGAL protein was acquired from Protein Data Bank (PDBID: 3U03). The ligand inside 3U03 was removed. ... We illustrated root mean square fluctuation(RMSF), database of secondary structure assignment and component (DSSP), smallest ... |
| 6 | 3r7k | - | http://journals.iucr.org/d/issues/2015/04/00/mh5170/mh5170bdy.html | A covalent adduct of MbtN, an acyl-ACP dehydrogenase from Mycobacterium tuberculosis, reveals an unusual acyl-binding pocket | 2015 | AF Chai, EMM Bulloch, GL Evans, JS Lott… - Acta Cryst. (2015). D71, 862-872 …, 2015 - journals.iucr.org | ... 2.10.0. Cambridge: Global Phasing Ltd.] ) alternating with manual rebuilding of the molecularstructure using Coot ... Protein, PDB code, C9-N10-N5-C4 (°), Distortion (°), Reference. ... Acyl-CoAdehydrogenase, 3r7k, 157.7, 22.3, Seattle Structural Genomics Center for Infectious Disease ... |
| 7 | 4wbs | - | http://rave.ohiolink.edu/etdc/view?acc_num=osu1523988371297363 | Genetic investigation of how an ATP hydrolysis cycle is coupled to lipopolysaccharide transport | 2018 | BW Simpson - 2018 - rave.ohiolink.edu | 36 1.3.1 Architecture of the ABC transporter family ..... 36 118 3.3.7 Crystallography data processing and structure determination ..... 118 6 Figure 1.3 MsbA undergoes structural conformational changes proposed to mediate LPS flipping This open dimer has also been observed for structures of LptB captured in the apo-state (PDB 4WBS, unpublished), |
| 8 | 3iew | - | https://pointloma.whdl.org/sites/default/files/Harper-Synthesis%20and%20Computat... | Synthesis and Computational Analysis of Novel IspF Inhibitors | 2018 | D Harper, M Rouffet, L Votapka- Bulletin of the American, 2018 - pointloma.whdl.org | The crystal structure of IspF was taken from the Protein Data Bank, code 3iew .7 The first As for the protein, the monomer's crystal structure was cleaned and protonated with the H++ webserver (version 3.2).11 The . pdb file was manually edited to correct these protonation states |
| 9 | 3eoo | - | https://opendata.uni-halle.de/handle/1981185920/8795 | Massenspektrometrische Untersuchungen zur Struktur der Peroxisom-Proliferator-aktivierten Rezeptoren- und-/ | 2017 | R Schwarz - 2017 - opendata.uni-halle.de | Optische Dichte bei 600 nm PAGE Polyacrylamid-Gelelektrophorese PBP PPAR Binding Protein PCR Polymerase-Kettenreaktion PDB Proteindatenbank PflB Pyruvate Formate Lyase PMSF Phenylmethansulfonylfluorid PPAR Peroxisom-Proliferator-aktiverter Rezeptor ppm ... Die umfangreichsten Röntgenkristallstrukturen wurden mit dem Subtyp PPAR-γ (PDBEinträge: 3DZU, 3DZY und 3EOO) gewonnen, in denen das Volllängenprotein ohne den flexiblen N-Terminus mit RXR-α und verschiedenen Liganden und Kofaktoren kokristallisier |
| 10 | 5eks | - | http://search.ebscohost.com/login.aspx?direct=true&profile=ehost&scope=site&auth... | In-silico three dimensional structure prediction of important Neisseria meningitidis proteins. | 2021 | M Ali, M Aurongzeb, Y Rashid- Pakistan Journal of, 2021 - search.ebscohost.com | Chain A of 3-dehydroquinate Synthase from Acinetobacter Baumannii in complex with NAD+ with PDB id 5EKS (to be published) was selected as a template structure . The template had 98% query coverage and 56% sequence identity with the target sequence |