SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 3rr2 3hwi http://repositorio.unicamp.br/handle/REPOSIP/335172 Caracterizao da via de captura/assimilao de sulfato em Mycobacterium tuberculosis: estratgias para o desenvolvimento de inibidores e potenciais alvos para 2019 AN Cerone - 2019 - repositorio.unicamp.br transport of several substances essential to the survival of organisms, which are poorly characterized in M. tuberculosis, the elucidation of structures and molecular SubI was expressed and purified and had its three-dimensional structure solved in the
2 5unb - https://www.biorxiv.org/content/early/2018/11/06/463554.abstract NEPRE: a Scoring Function for Protein Structures based on Neighbourhood Preference 2018 S Liu, X Xiang- bioRxiv, 2018 - biorxiv.org Based on the testing results and the comparison with several other structure assessment methods, we report that the neighborhood structural correctness. MATERIALS AND METHODS composed of 14,647 PDB structures , which were selected from the NCBI VAST (the vector
3 3ixc - http://www.earticle.net/Article.aspx?sn=291808 Molecular Docking Studies of Wolbachia Endosymbiont of Brugia Malayi's Carbonic Anhydrase Using Coumarin-chromene Derivatives Towards Designing Anti-filarial 2016 P Malathy, G Jagadeesan, K Gunasekaran - , 2016 - earticle.net ... The BLAST results shows a hexapeptide transferase family protein from Anaplasmaphagocytophilum (PDB ID: 3IXC) having 77% similarity and 54% identity with wBm carbonicanhydrase. Hence the above enzyme is chosen as the template and the 3D structure of carbonic ...
4 3eoo - http://is.muni.cz/th/256262/fi_m/thesis.pdf Computational Methods for Detecting Ligand Accessible Pathways 2012 L Pravda - 2012 - is.muni.cz ... Regarding the development of computers and the rapid growth of data in worldwide databases such as the Protein Data Bank [1], there have been demands on partial substitution of chemical experiment by computational models. ...
5 4oj7 - http://www.repositorio.ufop.br/handle/123456789/8872 Identificao de protenas exclusivas de fitopatgenos da famlia Xanthomonadaceae: uso de genmica comparativa para identificao de novos alvos de combate. 2016 RAB Assis - 2016 - repositorio.ufop.br Pro Prolina Ser Serina Thr Treonina Phe Fenilalanina Trp Triptofano Tyr Tirosina CAZy Carbohydrate active enzyme PDB Protein Data Bank Page 14. X RESUMO A famlia Xanthomonadaceae compreende espcies diferentes de proteobactrias no
6 4kyx - http://www.sciencedirect.com/science/article/pii/S1674205217303052 Structural insights into the substrate recognition mechanism of Arabidopsis thaliana GPP-bound NUDX1 for noncanonical monoterpene biosynthesis 2017 J Liu, Z Guan, H Liu, L Qi, D Zhang, T Zou, P Yin- Molecular Plant, 2017 - Elsevier ... P2 2121, determined 52 the structure by molecular replacement based on the available coordinates (MutT, PDB : 53 4KYX ) and refined ... Furthermore, our findings provide new opportunities for structure -guided 156 enzyme engineering (Wurtzel and Kutchan, 2016) and the ...
7 3uk1 3upt http://scholar.google.com/https://tel.archives-ouvertes.fr/tel-01136223/ Développement de biocapteurs ampérométriques pour la détermination de l'activité de la transcétolase et pour la détection d'inhibiteurs de cette enzyme 2013 N Touisni - 2013 - tel.archives-ouvertes.fr ... I.1.1.2. Structures tridimensionnelles des transcétolases ..... 11 ... biomolécules dans unematrice hôte apparait comme une méthode assez efficace tout en veillant à maintenirla structure de la biomolécule et son accessibilité par les substrats. ...
8 3la9 3laa, 4lgo, 3s6l http://elifesciences.org/content/5/e11861v1 alpha/beta coiled coils 2016 MD Hartmann, CT Mendler, J Bassler, I Karamichali - eLife, 2016 - elifesciences.org ... 286 Given the structural identity between the -layers resulting from hexads and nonads in 287coiled coils, and the supersecondary structures we characterized at the transition between 288 ...systematically for other instances of -layers in proteins of known structure. ...
9 4xfj 4oh7 http://arxiv.org/abs/1601.06764 FreeSASA: An open source C library for solvent accessible surface area calculation 2016 S Mitternacht - arXiv preprint arXiv:1601.06764, 2016 - arxiv.org ... 88 PDB files were selected randomly from a set of size intervals ... PISCES specifies a specific chainin each structure, but in the following all chains were used, which resulted in the ... 4c1a, 4cj0, 4g6t,4g7x, 4gmu, 4h7u, 4kv7, 4la2, 4lix, 4n13, 4oh7, 4oxx, 4p0t, 4pj2, 4qas, 4xfj, 7odc. ...
10 3gaf - http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4785404/ The three-dimensional structure of Clostridium absonum 7-hydroxysteroid dehydrogenase: new insights into the conserved arginines for NADP (H) 2016 D Lou, B Wang, J Tan, L Zhu, X Cen, Q Ji - Scientific reports, 2016 - ncbi.nlm.nih.gov ... They are Brucella Melitensis 7-HSDH with no ligand (PDB code: 3GAF) at resolution 2.20 and Escherichia coli 7-HSDH (EC 7-HSDH; PDB code: 1FMC ... As one of the SDRs, with thesimilar structure to the two 7-HSDHs above, CA 7-HSDH possesses the ...