We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TY0 | 2022 | 0 |
| 7TXZ | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4eff | 4ix8 | https://www.nature.com/srep/2016/160107/srep18880/full/srep18880.html | Crystal structures of Mycobacterium tuberculosis HspAT and ArAT reveal structural basis of their distinct substrate specificities | 2016 | N Nasir, A Anant, R Vyas, BK Biswal- Scientific reports, 2016 - nature.com | ... site residues of I aminotransferases across species, we performed a structure and sequence ... The source of each sequence and PDB ID are: Pyrococcus horikoshii ArAT (1DJU ... 8 , Paracoccus denitrificans ArAT (2AY1) 18 , Burkholderia pseudomallei ArAT ( 4EFF ), C. glutamicum ... |
| 2 | 3kre | - | http://www.freepatentsonline.com/y2019/0209499.html | COMPOUNDS WEAKENING SAICAR SYNTHETASE ACTIVITY AND APPLICATIONS | 2019 | W Pan, W Zhu- US Patent App. 16/334,256, 2019 - freepatentsonline.com | 3R9R), Thermotoga maritime (1KUT), Clostridium perfringens (3NUA), Ehrlichiachaffeensis ( 3KRE ), Geobacilluskaustophilus (2YWV basis of the above results, the crystal structure conformations in Saccharormyces cerevisiae ( PDB : 2CNQ) and Escherichia coli ( PDB : 2GQS) |
| 3 | 3k2c | - | https://www.biorxiv.org/content/biorxiv/early/2019/09/05/758029/DC1/embed/media-... | Supplementary material to GISA: Using Gauss Integrals to identify rare conformations in protein structures | 2019 | C Grnbk, T Hamelryck, P Rgen - 2019 - biorxiv.org | The rar2 scoring method scans for structures having a distribution of words significantly different from that found in the old, here set to 7 ngstrm; the E chain of the 2er7 structure is disqualified for this reason, but 7> means that in the PDB -file the chain id was left blank 14 |
| 4 | 3rih | - | https://repository.kulib.kyoto-u.ac.jp/dspace/bitstream/2433/200458/5/dnogk02134... | Studies on Structure-Function Relationship and Conversion of Coenzyme Requirement in Bacterial -Keto Acid Reductases Responsible for Metabolism of | 2015 | R Takase - 2015 - repository.kulib.kyoto-u.ac.jp | ... Data Page 5. 2 Bank ( PDB ) (www.wwpdb.org/) (40), in proportion to the progress in the field of structural biology. Structure -based biotechnology is expected to become an important part of post- structural biology. For ... |
| 5 | 4j5i | - | https://scholarship.rice.edu/handle/1911/95572 | Structural Studies in Natural Product Biosynthesis and Structure Determination | 2016 | L Han - 2016 - scholarship.rice.edu | Page 1. Page 2. ABSTRACT Structural Studies In Natural Product Biosynthesis And Structure Determination by Lu Han Natural living organisms produce many natural compounds with diverse structures . They are one of the most productive sources of drug/bio-probe ... Taurine dioxygenase TauD from Mycobacterium smegmatis, Z= 17.5, r.m.s.d. 3.0Å over aligned Cα residues, id 15% (PDB 4J5I) (Baugh et al., 2015). |
| 6 | 4tyz | - | https://repository.arizona.edu/handle/10150/630376 | PROTEIN-PROTEIN INTERACTIONS OF HUMAN PARVOVIRUS B19 NS1 AND IDENTIFICATION OF THE NS1 TRANSCRIPTIONAL TRANSACTIVATION DOMAIN | 2018 | AL Morano - 2018 - repository.arizona.edu | Page 1. PROTEIN-PROTEIN INTERACTIONS OF HUMAN PARVOVIRUS B19 NS1 AND IDENTIFICATION OF THE NS1 TRANSCRIPTIONAL TRANSACTIVATION DOMAIN Structure: Residues 112-214 share 32% sequence identity to x-ray crysal structure in PDB file 4TYZ chain A (a protein of unknown function). |
| 7 | 2lwk | - | https://deepblue.lib.umich.edu/handle/2027.42/155127 | Using Machine Learning to Better Predict the Structure of RNA and RNA Containing Complexes | 2020 | S Chhabra - 2020 - deepblue.lib.umich.edu | 53 3.5 Top 10 RNA Structures for 2LWK predicted from sequence using CS-Fold and Rosetta structures . The statistics from Protein Data Bank ( PDB ) (http://www.rcsb.org) current understanding of the RNA structure -function relationships is limited due to |
| 8 | 3uk1 | 3upt | http://scripts.iucr.org/cgi-bin/paper?tt5073 | High-resolution structures of Lactobacillus salivarius transketolase in the presence and absence of thiamine pyrophosphate | 2015 | P Lukacik, CMC Lobley, M Bumann - Section F: Structural , 2015 - scripts.iucr.org | ... In this work, we present high-resolution crystal structures of the L. salivarius UCC118 Tkt protein(LsTktA) in the presence and absence ... Burkholderia thailandensis (PDB entry 3uk1 ), B. pseudomallei (PDB entry 3upt ), ... |
| 9 | 4g5d | - | https://parasitesandvectors.biomedcentral.com/track/pdf/10.1186/s13071-020-3883-... | Leishmania braziliensis prostaglandin F | 2020 | EVC AlvesFerreira, TR Ferreira, P Walrad - 2020 - parasitesandvectors.biomedcentral | 1b) and the 3D structure (Fig c 3D sequence alignments of protein sequences of LmjPGF2S (PBD ID 4G5D , in grey) and human ortholog share 51.4% similarity and 34.3% identity, modelling using the Research Collabora- tory for Structural Bioinformatics (RCSB) PDB suggests |
| 10 | 4g50 | - | https://opus.bibliothek.uni-wuerzburg.de/files/32189/Scheuplein_Nicolas_Julian_D... | Fluorescent probe for the identification of potent inhibitors of the macrophage infectivity potentiator (Mip) protein of Burkholderia pseudomallei | 2023 | T Lohr, M Vivoli Vega, D Ankrett- Inhibitors of the - opus.bibliothek.uni-wuerzburg.de | corresponding co-crystal structures with BpMip; PDB ID 5V8T for 2 and PDB ID 4G50 for 3. in pink in the chemical structure . As can be seen from the crystal structures , in each case, the |